Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CopeO89079 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CopeO89079 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.64■□□□□ 0.09
CopeO89079 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.64■□□□□ 0.09
CopeO89079 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.64■□□□□ 0.09
CopeO89079 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CopeO89079 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CopeO89079 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CopeO89079 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CopeO89079 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.63■□□□□ 0.09
CopeO89079 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Grk6-207ENSMUST00000225925 2769 ntBASIC15.63■□□□□ 0.09
CopeO89079 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.63■□□□□ 0.09
CopeO89079 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.63■□□□□ 0.09
CopeO89079 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CopeO89079 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Gm18622-201ENSMUST00000219361 595 ntBASIC15.63■□□□□ 0.09
CopeO89079 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.63■□□□□ 0.09
CopeO89079 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CopeO89079 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CopeO89079 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.63■□□□□ 0.09
CopeO89079 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.63■□□□□ 0.09
CopeO89079 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.63■□□□□ 0.09
CopeO89079 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.62■□□□□ 0.09
CopeO89079 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.62■□□□□ 0.09
CopeO89079 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.62■□□□□ 0.09
CopeO89079 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.62■□□□□ 0.09
CopeO89079 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CopeO89079 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CopeO89079 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
CopeO89079 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.61■□□□□ 0.09
CopeO89079 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms