Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cldn1O88551 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.98□□□□□ -0.33
Cldn1O88551 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cldn1O88551 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.98□□□□□ -0.33
Cldn1O88551 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.98□□□□□ -0.33
Cldn1O88551 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm27430-201ENSMUST00000184585 107 ntBASIC12.98□□□□□ -0.33
Cldn1O88551 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.98□□□□□ -0.33
Cldn1O88551 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Gm44333-201ENSMUST00000197168 107 ntBASIC12.98□□□□□ -0.33
Cldn1O88551 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldn1O88551 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cldn1O88551 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.97□□□□□ -0.33
Cldn1O88551 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Rpph1-201ENSMUST00000175096 319 ntBASIC12.97□□□□□ -0.33
Cldn1O88551 Gm5866-201ENSMUST00000177881 973 ntBASIC12.97□□□□□ -0.33
Cldn1O88551 Gm43767-201ENSMUST00000198933 381 ntBASIC12.97□□□□□ -0.33
Cldn1O88551 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cldn1O88551 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cldn1O88551 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cldn1O88551 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldn1O88551 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldn1O88551 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms