Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.01□□□□□ -0.17
Cops4O88544 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cops4O88544 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.01□□□□□ -0.17
Cops4O88544 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.01□□□□□ -0.17
Cops4O88544 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cops4O88544 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cops4O88544 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cops4O88544 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cops4O88544 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cops4O88544 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cops4O88544 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14□□□□□ -0.17
Cops4O88544 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 CT009713.7-201ENSMUST00000224689 571 ntBASIC14□□□□□ -0.17
Cops4O88544 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14□□□□□ -0.17
Cops4O88544 Gm14780-201ENSMUST00000118387 2737 ntBASIC14□□□□□ -0.17
Cops4O88544 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cops4O88544 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14□□□□□ -0.17
Cops4O88544 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cops4O88544 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cops4O88544 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cops4O88544 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cops4O88544 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cops4O88544 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.99□□□□□ -0.17
Cops4O88544 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.99□□□□□ -0.17
Cops4O88544 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Cops4O88544 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cops4O88544 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Gm5587-201ENSMUST00000206270 674 ntBASIC13.99□□□□□ -0.17
Cops4O88544 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.99□□□□□ -0.17
Cops4O88544 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cops4O88544 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cops4O88544 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cops4O88544 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms