Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfrsf17O88472 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm4875-201ENSMUST00000118257 786 ntBASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm15806-201ENSMUST00000120696 955 ntBASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm45331-201ENSMUST00000209868 554 ntBASIC14.01□□□□□ -0.17
Tnfrsf17O88472 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfrsf17O88472 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfrsf17O88472 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14□□□□□ -0.17
Tnfrsf17O88472 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.99□□□□□ -0.17
Tnfrsf17O88472 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms