Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnnt1O88346 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tnnt1O88346 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnnt1O88346 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.33■□□□□ 0.68
Tnnt1O88346 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Tnnt1O88346 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Tnnt1O88346 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnnt1O88346 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.32■□□□□ 0.68
Tnnt1O88346 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Tnnt1O88346 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.32■□□□□ 0.68
Tnnt1O88346 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.32■□□□□ 0.68
Tnnt1O88346 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnnt1O88346 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tnnt1O88346 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnnt1O88346 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Gm45612-201ENSMUST00000211320 160 ntBASIC19.31■□□□□ 0.68
Tnnt1O88346 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.31■□□□□ 0.68
Tnnt1O88346 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.31■□□□□ 0.68
Tnnt1O88346 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Tnnt1O88346 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.31■□□□□ 0.68
Tnnt1O88346 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnnt1O88346 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnnt1O88346 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Tnnt1O88346 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tnnt1O88346 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.3■□□□□ 0.68
Tnnt1O88346 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.3■□□□□ 0.68
Tnnt1O88346 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.3■□□□□ 0.68
Tnnt1O88346 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.3■□□□□ 0.68
Tnnt1O88346 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Tnnt1O88346 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Tnnt1O88346 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnnt1O88346 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms