Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Ubr1O70481 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.4■□□□□ 0.7
Ubr1O70481 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.39■□□□□ 0.7
Ubr1O70481 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ubr1O70481 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC19.39■□□□□ 0.7
Ubr1O70481 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC19.39■□□□□ 0.7
Ubr1O70481 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC19.39■□□□□ 0.7
Ubr1O70481 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC19.39■□□□□ 0.7
Ubr1O70481 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ubr1O70481 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.39■□□□□ 0.7
Ubr1O70481 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.39■□□□□ 0.7
Ubr1O70481 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ubr1O70481 Gm46209-201ENSMUST00000217912 553 ntBASIC19.39■□□□□ 0.7
Ubr1O70481 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ubr1O70481 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.39■□□□□ 0.69
Ubr1O70481 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.39■□□□□ 0.69
Ubr1O70481 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ubr1O70481 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Ubr1O70481 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.39■□□□□ 0.69
Ubr1O70481 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.39■□□□□ 0.69
Ubr1O70481 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ubr1O70481 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.38■□□□□ 0.69
Ubr1O70481 Gm9229-201ENSMUST00000222777 126 ntBASIC19.38■□□□□ 0.69
Ubr1O70481 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.38■□□□□ 0.69
Ubr1O70481 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ubr1O70481 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.37■□□□□ 0.69
Ubr1O70481 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.37■□□□□ 0.69
Ubr1O70481 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ubr1O70481 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ubr1O70481 Gm9522-201ENSMUST00000182394 926 ntBASIC19.37■□□□□ 0.69
Ubr1O70481 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.37■□□□□ 0.69
Ubr1O70481 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.37■□□□□ 0.69
Ubr1O70481 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ubr1O70481 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ubr1O70481 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ubr1O70481 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ubr1O70481 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.36■□□□□ 0.69
Ubr1O70481 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Gm8749-201ENSMUST00000117737 331 ntBASIC19.36■□□□□ 0.69
Ubr1O70481 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.36■□□□□ 0.69
Ubr1O70481 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ubr1O70481 Gm43438-201ENSMUST00000198133 379 ntBASIC19.36■□□□□ 0.69
Ubr1O70481 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.36■□□□□ 0.69
Ubr1O70481 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ubr1O70481 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Prob1-201ENSMUST00000097619 3021 ntBASIC19.36■□□□□ 0.69
Ubr1O70481 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ubr1O70481 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms