Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.74□□□□□ -0.21
Pdlim3O70209 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Gm44454-201ENSMUST00000198541 138 ntBASIC13.74□□□□□ -0.21
Pdlim3O70209 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pdlim3O70209 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.74□□□□□ -0.21
Pdlim3O70209 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pdlim3O70209 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.73□□□□□ -0.21
Pdlim3O70209 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pdlim3O70209 Grk6-207ENSMUST00000225925 2769 ntBASIC13.73□□□□□ -0.21
Pdlim3O70209 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim3O70209 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.73□□□□□ -0.21
Pdlim3O70209 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pdlim3O70209 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.73□□□□□ -0.21
Pdlim3O70209 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Gm17808-201ENSMUST00000200859 894 ntBASIC13.73□□□□□ -0.21
Pdlim3O70209 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pdlim3O70209 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Pdlim3O70209 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pdlim3O70209 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.72□□□□□ -0.21
Pdlim3O70209 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.71□□□□□ -0.21
Pdlim3O70209 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pdlim3O70209 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms