Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm27533-201ENSMUST00000183800 152 ntBASIC14.6□□□□□ -0.07
Cacna1bO55017 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm43703-201ENSMUST00000200523 763 ntBASIC14.6□□□□□ -0.07
Cacna1bO55017 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.6□□□□□ -0.07
Cacna1bO55017 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.6□□□□□ -0.07
Cacna1bO55017 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.59□□□□□ -0.07
Cacna1bO55017 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Gm38225-201ENSMUST00000194001 393 ntBASIC14.59□□□□□ -0.07
Cacna1bO55017 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.59□□□□□ -0.07
Cacna1bO55017 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.59□□□□□ -0.07
Cacna1bO55017 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cacna1bO55017 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cacna1bO55017 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1bO55017 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Cacna1bO55017 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1bO55017 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cacna1bO55017 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.58□□□□□ -0.08
Cacna1bO55017 Gm27838-201ENSMUST00000184829 128 ntBASIC14.58□□□□□ -0.08
Cacna1bO55017 Gm43630-201ENSMUST00000201550 776 ntBASIC14.58□□□□□ -0.08
Cacna1bO55017 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Cacna1bO55017 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Gm22189-201ENSMUST00000103822 86 ntBASIC14.58□□□□□ -0.08
Cacna1bO55017 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.58□□□□□ -0.08
Cacna1bO55017 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cacna1bO55017 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cacna1bO55017 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm24694-201ENSMUST00000180054 110 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm27663-201ENSMUST00000184839 110 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Shd-206ENSMUST00000225145 998 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.57□□□□□ -0.08
Cacna1bO55017 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cacna1bO55017 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cacna1bO55017 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms