Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.45□□□□□ -0.1
Clk3O35492 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk3O35492 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk3O35492 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk3O35492 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.45□□□□□ -0.1
Clk3O35492 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clk3O35492 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Clk3O35492 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clk3O35492 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.44□□□□□ -0.1
Clk3O35492 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.44□□□□□ -0.1
Clk3O35492 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.44□□□□□ -0.1
Clk3O35492 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.44□□□□□ -0.1
Clk3O35492 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Clk3O35492 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Clk3O35492 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clk3O35492 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk3O35492 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk3O35492 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.43□□□□□ -0.1
Clk3O35492 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk3O35492 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clk3O35492 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clk3O35492 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.43□□□□□ -0.1
Clk3O35492 Gm43347-201ENSMUST00000200226 580 ntBASIC14.43□□□□□ -0.1
Clk3O35492 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.43□□□□□ -0.1
Clk3O35492 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.43□□□□□ -0.1
Clk3O35492 Gm8655-201ENSMUST00000221159 852 ntBASIC14.43□□□□□ -0.1
Clk3O35492 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Clk3O35492 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Clk3O35492 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.43□□□□□ -0.1
Clk3O35492 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clk3O35492 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clk3O35492 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Clk3O35492 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Clk3O35492 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.42□□□□□ -0.1
Clk3O35492 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk3O35492 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.42□□□□□ -0.1
Clk3O35492 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.42□□□□□ -0.1
Clk3O35492 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clk3O35492 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms