Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.09□□□□□ -0.15
Hps1O08983 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hps1O08983 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.09□□□□□ -0.15
Hps1O08983 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.09□□□□□ -0.15
Hps1O08983 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.09□□□□□ -0.15
Hps1O08983 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Hps1O08983 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hps1O08983 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hps1O08983 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Hps1O08983 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hps1O08983 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hps1O08983 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Hps1O08983 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hps1O08983 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Hps1O08983 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Hps1O08983 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hps1O08983 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Hps1O08983 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.08□□□□□ -0.15
Hps1O08983 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hps1O08983 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hps1O08983 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Hps1O08983 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hps1O08983 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.08□□□□□ -0.16
Hps1O08983 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hps1O08983 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.08□□□□□ -0.16
Hps1O08983 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hps1O08983 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.08□□□□□ -0.16
Hps1O08983 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Hps1O08983 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.08□□□□□ -0.16
Hps1O08983 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hps1O08983 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hps1O08983 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.07□□□□□ -0.16
Hps1O08983 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.07□□□□□ -0.16
Hps1O08983 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.07□□□□□ -0.16
Hps1O08983 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Hps1O08983 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Hps1O08983 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.07□□□□□ -0.16
Hps1O08983 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Hps1O08983 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.07□□□□□ -0.16
Hps1O08983 Gm2651-201ENSMUST00000203560 838 ntBASIC14.07□□□□□ -0.16
Hps1O08983 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hps1O08983 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hps1O08983 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Hps1O08983 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hps1O08983 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.06□□□□□ -0.16
Hps1O08983 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.06□□□□□ -0.16
Hps1O08983 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Hps1O08983 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hps1O08983 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms