Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.69■□□□□ 0.42
Tcof1O08784 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Gm15427-201ENSMUST00000117288 531 ntBASIC17.69■□□□□ 0.42
Tcof1O08784 Gm9385-201ENSMUST00000117563 472 ntBASIC17.69■□□□□ 0.42
Tcof1O08784 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.69■□□□□ 0.42
Tcof1O08784 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.69■□□□□ 0.42
Tcof1O08784 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.69■□□□□ 0.42
Tcof1O08784 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tcof1O08784 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.69■□□□□ 0.42
Tcof1O08784 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.69■□□□□ 0.42
Tcof1O08784 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Tcof1O08784 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tcof1O08784 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Tcof1O08784 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.68■□□□□ 0.42
Tcof1O08784 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.68■□□□□ 0.42
Tcof1O08784 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.68■□□□□ 0.42
Tcof1O08784 Chchd1-203ENSMUST00000224633 557 ntBASIC17.68■□□□□ 0.42
Tcof1O08784 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tcof1O08784 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcof1O08784 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tcof1O08784 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.67■□□□□ 0.42
Tcof1O08784 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Tcof1O08784 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.67■□□□□ 0.42
Tcof1O08784 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.67■□□□□ 0.42
Tcof1O08784 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm17271-201ENSMUST00000165535 355 ntBASIC17.67■□□□□ 0.42
Tcof1O08784 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm27301-201ENSMUST00000184012 127 ntBASIC17.67■□□□□ 0.42
Tcof1O08784 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.67■□□□□ 0.42
Tcof1O08784 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tcof1O08784 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tcof1O08784 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tcof1O08784 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.66■□□□□ 0.42
Tcof1O08784 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcof1O08784 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.66■□□□□ 0.42
Tcof1O08784 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tcof1O08784 Gm20553-201ENSMUST00000204205 844 ntBASIC17.66■□□□□ 0.42
Tcof1O08784 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms