Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rfpl4bJ3QPR6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gm8410-201ENSMUST00000117225 605 ntBASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gm16026-204ENSMUST00000162652 683 ntBASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gm2423-201ENSMUST00000074863 733 ntBASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfpl4bJ3QPR6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Mir7684-201ENSMUST00000183858 60 ntBASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfpl4bJ3QPR6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfpl4bJ3QPR6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Gm6888-201ENSMUST00000221983 706 ntBASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfpl4bJ3QPR6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfpl4bJ3QPR6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rfpl4bJ3QPR6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms