Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-3J3QMG8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Mir5126-201ENSMUST00000175513 77 ntBASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-3J3QMG8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Gm27628-201ENSMUST00000184911 107 ntBASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Gm7461-201ENSMUST00000058918 827 ntBASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-3J3QMG8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms