Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC20.52■□□□□ 0.88
Zc3h13E9Q784 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.52■□□□□ 0.88
Zc3h13E9Q784 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3h13E9Q784 Gm5763-201ENSMUST00000155951 1530 ntBASIC20.52■□□□□ 0.87
Zc3h13E9Q784 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.52■□□□□ 0.87
Zc3h13E9Q784 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Gm27892-201ENSMUST00000185017 106 ntBASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Gm37424-201ENSMUST00000191727 561 ntBASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h13E9Q784 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.5■□□□□ 0.87
Zc3h13E9Q784 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h13E9Q784 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h13E9Q784 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.48■□□□□ 0.87
Zc3h13E9Q784 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Gm11661-201ENSMUST00000121761 1327 ntBASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zc3h13E9Q784 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Gm28911-201ENSMUST00000188837 117 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Gm45751-201ENSMUST00000210185 1573 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 AC159896.2-201ENSMUST00000214753 269 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 AC154319.1-201ENSMUST00000216330 312 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 AL589735.1-201ENSMUST00000224353 270 ntBASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Zc3h13E9Q784 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms