Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc85cE9Q6B2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ccdc85cE9Q6B2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.52■□□□□ 0.55
Ccdc85cE9Q6B2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc85cE9Q6B2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ccdc85cE9Q6B2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ccdc85cE9Q6B2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Gm12341-201ENSMUST00000119724 503 ntBASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Gm6222-201ENSMUST00000120787 396 ntBASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc85cE9Q6B2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm6244-201ENSMUST00000178732 841 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm29310-201ENSMUST00000185468 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm21825-201ENSMUST00000185728 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm29109-201ENSMUST00000185895 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm21896-201ENSMUST00000186520 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm21873-201ENSMUST00000186728 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm21794-201ENSMUST00000187056 696 ntBASIC18.49■□□□□ 0.55
Ccdc85cE9Q6B2 Gm21880-201ENSMUST00000187275 696 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms