Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm26083-201ENSMUST00000157904 193 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm22334-201ENSMUST00000158070 133 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm29127-201ENSMUST00000188304 517 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm43822-201ENSMUST00000200285 476 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm9823-201ENSMUST00000051212 327 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Chd6A3KFM7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.17□□□□□ -0.46
Chd6A3KFM7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.16□□□□□ -0.46
Chd6A3KFM7 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.16□□□□□ -0.46
Chd6A3KFM7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.16□□□□□ -0.46
Chd6A3KFM7 B9d1os-201ENSMUST00000137010 674 ntBASIC12.16□□□□□ -0.46
Chd6A3KFM7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chd6A3KFM7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gm5363-201ENSMUST00000211927 938 ntBASIC12.15□□□□□ -0.46
Chd6A3KFM7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.15□□□□□ -0.46
Chd6A3KFM7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chd6A3KFM7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms