Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-1A0N8R1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-1A0N8R1 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.65□□□□□ -0.39
Trav12-1A0N8R1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12-1A0N8R1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12-1A0N8R1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-1A0N8R1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms