Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Mir6956-201ENSMUST00000183598 62 ntBASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap99A0A140LIX9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cfap99A0A140LIX9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cfap99A0A140LIX9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cfap99A0A140LIX9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms