Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav9d-4A0A0G2JG37 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav9d-4A0A0G2JG37 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav9d-4A0A0G2JG37 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Gm10052-201ENSMUST00000168019 960 ntBASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Gm7729-201ENSMUST00000050143 801 ntBASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav9d-4A0A0G2JG37 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav9d-4A0A0G2JG37 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms