Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm30025-201ENSMUST00000218555 728 ntBASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms