Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm18206-201ENSMUST00000207027 926 ntBASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm27628-201ENSMUST00000184911 107 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm43514-201ENSMUST00000198852 424 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm7787-201ENSMUST00000216858 688 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.93□□□□□ -0.18
Trbc1A0A0A6YWV4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm9682-201ENSMUST00000197505 556 ntBASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbc1A0A0A6YWV4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms