Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-1A0A075B699 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-1A0A075B699 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav9d-1A0A075B699 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm33142-201ENSMUST00000193913 867 ntBASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9d-1A0A075B699 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9d-1A0A075B699 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms