Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.44□□□□□ -0.42
Trav18A0A075B656 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trav18A0A075B656 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.43□□□□□ -0.42
Trav18A0A075B656 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.43□□□□□ -0.42
Trav18A0A075B656 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.43□□□□□ -0.42
Trav18A0A075B656 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Gm27357-201ENSMUST00000183754 135 ntBASIC12.43□□□□□ -0.42
Trav18A0A075B656 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.43□□□□□ -0.42
Trav18A0A075B656 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav18A0A075B656 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm8097-201ENSMUST00000117903 829 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm8655-201ENSMUST00000221159 852 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.42□□□□□ -0.42
Trav18A0A075B656 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav18A0A075B656 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm15372-201ENSMUST00000120729 834 ntBASIC12.41□□□□□ -0.42
Trav18A0A075B656 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav18A0A075B656 Gm12895-201ENSMUST00000122214 226 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms