Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-4A0A075B652 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gm15372-201ENSMUST00000120729 834 ntBASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gm12497-201ENSMUST00000138778 237 ntBASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gm18622-201ENSMUST00000219361 595 ntBASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-4A0A075B652 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav5-4A0A075B652 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Gm12895-201ENSMUST00000122214 226 ntBASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav5-4A0A075B652 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav5-4A0A075B652 Gm17807-201ENSMUST00000186869 298 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms