Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav7n-4A0A075B620 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav7n-4A0A075B620 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Odf3b-204ENSMUST00000227834 930 ntBASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav7n-4A0A075B620 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms