Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm12008-201ENSMUST00000117791 755 ntBASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm12497-201ENSMUST00000138778 237 ntBASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-1A0A075B5Z8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm8318-201ENSMUST00000182954 872 ntBASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm17808-201ENSMUST00000200859 894 ntBASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-1A0A075B5Z8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm25016-201ENSMUST00000158399 131 ntBASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6-1A0A075B5Z8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms