Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm4995-201ENSMUST00000117247 432 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm16198-201ENSMUST00000118766 670 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm11025-201ENSMUST00000140773 466 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm27494-201ENSMUST00000184735 189 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm43767-201ENSMUST00000198933 381 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm45612-201ENSMUST00000211320 160 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Celf4-206ENSMUST00000224553 1729 ntBASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav5-1A0A075B5Z7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.97□□□□□ -0.33
Trav5-1A0A075B5Z7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav5-1A0A075B5Z7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms