Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb3S4R1G7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm4459-201ENSMUST00000118750 468 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm15372-201ENSMUST00000120729 834 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Gm8655-201ENSMUST00000221159 852 ntBASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
H2afb3S4R1G7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gm14859-201ENSMUST00000117752 357 ntBASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
H2afb3S4R1G7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.65□□□□□ -0.22
H2afb3S4R1G7 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.65□□□□□ -0.22
H2afb3S4R1G7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms