Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mir6990-201ENSMUST00000183724 91 ntBASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h3Q9Z0Y9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1h3Q9Z0Y9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
Nr1h3Q9Z0Y9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1h3Q9Z0Y9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h3Q9Z0Y9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 AA543401-201ENSMUST00000164248 1269 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm18889-201ENSMUST00000174284 929 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h3Q9Z0Y9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms