Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Gm27867-201ENSMUST00000184778 125 ntBASIC13.62□□□□□ -0.23
AireQ9Z0E3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Gm44430-201ENSMUST00000203376 995 ntBASIC13.62□□□□□ -0.23
AireQ9Z0E3 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.62□□□□□ -0.23
AireQ9Z0E3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Rps4l-201ENSMUST00000071745 943 ntBASIC13.62□□□□□ -0.23
AireQ9Z0E3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.62□□□□□ -0.23
AireQ9Z0E3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AireQ9Z0E3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.61□□□□□ -0.23
AireQ9Z0E3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.61□□□□□ -0.23
AireQ9Z0E3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AireQ9Z0E3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gm15165-201ENSMUST00000118140 502 ntBASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gm44454-201ENSMUST00000198541 138 ntBASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.6□□□□□ -0.23
AireQ9Z0E3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AireQ9Z0E3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms