Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Mir6404-201ENSMUST00000183699 94 ntBASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col13a1Q9R1N9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col13a1Q9R1N9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.91□□□□□ -0.34
Col13a1Q9R1N9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms