Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gpc6Q9R087 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Gpc6Q9R087 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.22□□□□□ -0.13
Gpc6Q9R087 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gpc6Q9R087 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gpc6Q9R087 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.21□□□□□ -0.13
Gpc6Q9R087 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gpc6Q9R087 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gpc6Q9R087 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gpc6Q9R087 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gpc6Q9R087 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gpc6Q9R087 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gpc6Q9R087 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.19□□□□□ -0.14
Gpc6Q9R087 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Gm12134-201ENSMUST00000122109 520 ntBASIC14.19□□□□□ -0.14
Gpc6Q9R087 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Gm6257-201ENSMUST00000163864 910 ntBASIC14.19□□□□□ -0.14
Gpc6Q9R087 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gpc6Q9R087 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.18□□□□□ -0.14
Gpc6Q9R087 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gpc6Q9R087 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms