Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Gm18489-201ENSMUST00000172565 551 ntBASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Gm17968-201ENSMUST00000194902 784 ntBASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shroom3Q9QXN0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shroom3Q9QXN0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shroom3Q9QXN0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Shroom3Q9QXN0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms