Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm16112-201ENSMUST00000159075 382 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm18595-201ENSMUST00000175736 1068 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Msh5Q9QUM7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Gm38018-201ENSMUST00000195651 540 ntBASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.62■□□□□ 0.09
Msh5Q9QUM7 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.62■□□□□ 0.09
Msh5Q9QUM7 CT010480.1-201ENSMUST00000223612 363 ntBASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Msh5Q9QUM7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Gm15372-201ENSMUST00000120729 834 ntBASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Gm25406-201ENSMUST00000157599 105 ntBASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Gm29747-201ENSMUST00000194764 585 ntBASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.61■□□□□ 0.09
Msh5Q9QUM7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Gm25745-201ENSMUST00000174945 133 ntBASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC15.6■□□□□ 0.09
Msh5Q9QUM7 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh5Q9QUM7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms