Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tmem54Q9D7S1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Gm9727-201ENSMUST00000161387 555 ntBASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Gm43514-201ENSMUST00000198852 424 ntBASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.28□□□□□ -0.28
Tmem54Q9D7S1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tmem54Q9D7S1 Gm13597-201ENSMUST00000121239 375 ntBASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Gm27525-201ENSMUST00000184465 107 ntBASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tmem54Q9D7S1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms