Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1bQ9D0N7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1bQ9D0N7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Chaf1bQ9D0N7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Gm6623-201ENSMUST00000173570 544 ntBASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Chaf1bQ9D0N7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chaf1bQ9D0N7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Chaf1bQ9D0N7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms