Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.06□□□□□ -0.16
Trim13Q9CYB0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim13Q9CYB0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim13Q9CYB0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim13Q9CYB0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim13Q9CYB0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim13Q9CYB0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms