Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm5312-201ENSMUST00000203728 547 ntBASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Gm45612-201ENSMUST00000211320 160 ntBASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 AC147366.1-201ENSMUST00000227671 852 ntBASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Gm26226-201ENSMUST00000082509 116 ntBASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Sec61bQ9CQS8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mypopos-202ENSMUST00000205975 2321 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm38318-201ENSMUST00000195769 1706 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm15074-201ENSMUST00000117603 936 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Auts2-212ENSMUST00000178555 309 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm6098-201ENSMUST00000180234 330 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm32999-201ENSMUST00000192693 562 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm2272-201ENSMUST00000194903 582 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Gm18363-201ENSMUST00000221671 730 ntBASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Sec61bQ9CQS8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Sec61bQ9CQS8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms