Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RTRAFQ9CQE8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Gm37856-201ENSMUST00000191634 999 ntBASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RTRAFQ9CQE8 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RTRAFQ9CQE8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RTRAFQ9CQE8 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms