Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mrpl54Q9CPW3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mrpl54Q9CPW3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm7370-201ENSMUST00000219471 767 ntBASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mrpl54Q9CPW3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Odf3b-204ENSMUST00000227834 930 ntBASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Mrpl54Q9CPW3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Mrpl54Q9CPW3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Mrpl54Q9CPW3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms