Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim16Q99PP9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.86□□□□□ -0.03
Trim16Q99PP9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim16Q99PP9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm8097-201ENSMUST00000117903 829 ntBASIC14.85□□□□□ -0.03
Trim16Q99PP9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm27741-201ENSMUST00000185060 237 ntBASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm8655-201ENSMUST00000221159 852 ntBASIC14.85□□□□□ -0.03
Trim16Q99PP9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.85□□□□□ -0.03
Trim16Q99PP9 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.85□□□□□ -0.03
Trim16Q99PP9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.84□□□□□ -0.03
Trim16Q99PP9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.84□□□□□ -0.03
Trim16Q99PP9 Gm18622-201ENSMUST00000219361 595 ntBASIC14.84□□□□□ -0.03
Trim16Q99PP9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.84□□□□□ -0.03
Trim16Q99PP9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim16Q99PP9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms