Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Gm13223-201ENSMUST00000118609 747 ntBASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Gm12428-201ENSMUST00000119844 727 ntBASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.65■□□□□ 0.58
Trim34aQ99PP6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trim34aQ99PP6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Trim34aQ99PP6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gm8410-201ENSMUST00000117225 605 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gm27920-201ENSMUST00000183953 96 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gm17837-201ENSMUST00000186435 985 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim34aQ99PP6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Gm18049-201ENSMUST00000208909 581 ntBASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim34aQ99PP6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Gm5186-201ENSMUST00000218781 920 ntBASIC18.62■□□□□ 0.57
Trim34aQ99PP6 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim34aQ99PP6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms