Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Col25a1Q99MQ5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Gm16198-201ENSMUST00000118766 670 ntBASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Gm15806-201ENSMUST00000120696 955 ntBASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col25a1Q99MQ5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Gm4984-201ENSMUST00000115987 360 ntBASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Gm14042-201ENSMUST00000120139 833 ntBASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Gm15823-201ENSMUST00000064305 670 ntBASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col25a1Q99MQ5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Gm16570-201ENSMUST00000161951 436 ntBASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col25a1Q99MQ5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Gm10499-201ENSMUST00000174094 934 ntBASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Gm27680-201ENSMUST00000184192 160 ntBASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Gm28630-201ENSMUST00000187806 498 ntBASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Gm29667-201ENSMUST00000190817 490 ntBASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.66■□□□□ 0.1
Col25a1Q99MQ5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms