Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf111Q99ML9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm4459-201ENSMUST00000118750 468 ntBASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rnf111Q99ML9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf111Q99ML9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf111Q99ML9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf111Q99ML9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms