Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Lims1Q99JW4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lims1Q99JW4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lims1Q99JW4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.83□□□□□ -0.2
Lims1Q99JW4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.83□□□□□ -0.2
Lims1Q99JW4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lims1Q99JW4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lims1Q99JW4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms