Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhb8Q91XZ2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Gm8318-201ENSMUST00000182954 872 ntBASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb8Q91XZ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Gm24589-201ENSMUST00000116692 94 ntBASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb8Q91XZ2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb8Q91XZ2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Gm10819-201ENSMUST00000099988 561 ntBASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb8Q91XZ2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb8Q91XZ2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms