Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SfpqQ8VIJ6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Mir3081-201ENSMUST00000175305 84 ntBASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SfpqQ8VIJ6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Gm10231-201ENSMUST00000181584 441 ntBASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Gm10175-202ENSMUST00000208752 441 ntBASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SfpqQ8VIJ6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SfpqQ8VIJ6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SfpqQ8VIJ6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SfpqQ8VIJ6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SfpqQ8VIJ6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Gm8344-201ENSMUST00000119813 856 ntBASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Gm12134-201ENSMUST00000122109 520 ntBASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SfpqQ8VIJ6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SfpqQ8VIJ6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SfpqQ8VIJ6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16■□□□□ 0.15
SfpqQ8VIJ6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SfpqQ8VIJ6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SfpqQ8VIJ6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms