Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rab40bQ8VHP8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Gm10252-201ENSMUST00000209541 832 ntBASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Gm18032-201ENSMUST00000222541 538 ntBASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab40bQ8VHP8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Rab40bQ8VHP8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.64□□□□□ -0.23
Rab40bQ8VHP8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab40bQ8VHP8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms