Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx39aQ8VDW0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Ddx39aQ8VDW0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx39aQ8VDW0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm13616-201ENSMUST00000120600 222 ntBASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Auts2-212ENSMUST00000178555 309 ntBASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm43474-201ENSMUST00000196415 774 ntBASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx39aQ8VDW0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ddx39aQ8VDW0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Gm15920-201ENSMUST00000118998 402 ntBASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ddx39aQ8VDW0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms