Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ndc1Q8VCB1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Ndc1Q8VCB1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ndc1Q8VCB1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Gm13597-201ENSMUST00000121239 375 ntBASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Gm17271-201ENSMUST00000165535 355 ntBASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Sybu-209ENSMUST00000228639 4113 ntBASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.33□□□□□ -0.12
Ndc1Q8VCB1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.32□□□□□ -0.12
Ndc1Q8VCB1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.31□□□□□ -0.12
Ndc1Q8VCB1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms